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Services

End-to-End Microbiome Consulting


Unlike standard sequencing labs, we work hand-in-hand with you from study planning to publication-ready insights. Whether you need help designing a study, sequencing samples, or extracting AI-powered patterns, we ensure your microbiome data leads to real discoveries.

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 Study Planning & Research Design

Start your project with a solid, scientifically sound strategy 

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 Sequencing & Data Processing

Generate high-quality sequencing data with expert-guided workflows 

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Bioinformatics and Data Interpretation

Turn complex microbiome data into meaningful, publishable insights 

Study Planning & Research Design  


Plan with confidence from day one. We help you create a microbiome study that is scientifically sound, statistically robust, and clinically relevant.

  • Hypothesis & Study Design: We advise on consultation on research objectives, controls, and sample size. sample size, control groups, and sequencing approaches to ensure robust, statistically sound results.
  • Sequencing Strategy Optimization: Tailored 16S, shotgun metagenomics, or multi-omics approach for your study.
  • Regulatory & Ethical Considerations: Our team ensures that your study aligns with relevant guidelines for clinical sample collection, data privacy, and compliance.
  • Manuscript & Peer-Review Support: Ensure results are publication-ready with our expert guidance.

Outcome for You: Get a fully optimized research plan that ensures high-impact results & successful funding applications.

Microbiome Data Analysis


End-to-end workflow for clinical & research samples

From sample handling to advanced bioinformatics, we provide an end-to-end microbiome analysis pipeline. We can receive your biological samples, perform DNA extraction, organize next-generation sequencing, and deliver an in-depth pipeline analysis—including taxonomic profiling, functional/pathway annotation, and identification of AMR (antimicrobial resistance) genes.

  • Sample Processing, DNA Extraction & Library Preparation: We coordinate logistics for receiving and storing clinical samples, adhering to strict quality control and biosafety standards to ensure high-purity DNA, optimized for your chosen sequencing platform.
  • Sequencing & Data Processing: We handle library prep, run the sequencing, and generate high-quality reads. Then, we perform advanced filtering, decontamination, and assembly (if needed) to ensure robust downstream analysis.
  • Taxonomic & Pathway Analysis: Using state-of-the-art bioinformatics pipelines to identify microbes, metabolic pathways, and other functional markers relevant to your study.
  • Comprehensive Reporting & Visualization: We deliver user-friendly reports with clear data visualizations, highlighting key trends, differentially abundant taxa, and functional pathways of interest.

Outcome for You: Get high-quality, publication-ready microbiome insights with minimal effort on your end.

Custom Research Solutions

Tailored Pipelines & Specialized Analysis

No two microbiome projects are the same. We tailor analysis pipelines to meet your specific research goals.

  • Bespoke Pipeline Development: We design custom workflows (in R, Python, or cloud-based tools) for specialized analyses, from gene-level variant detection to novel pathway exploration.
  • Focused Functional Analysis: If you’re investigating particular AMR genes, immunological pathways, or unique microbial functions, we build targeted approaches to maximize detection and accuracy.
  • Multi-Stage Consultation & Collaboration: We work alongside your team or lab, providing continuous feedback, pipeline updates, and iterative improvements as your project evolves.
  • Publication Support: If you’d like our expertise throughout the publication process, we can contribute methods, figures, and manuscript reviews to strengthen your final paper.

Outcome for You: Get a custom designed analysis specific for your study’s objectives—no matter how niche or complex your research questions may be.

 Ready to take the next step

From initial consultation to final visualization, Healthinteli’s suite of services is built to address the diverse needs of clinicians, researchers, and biotech innovators. Contact us today to discuss your project goals and discover how we can help transform your microbiome data into actionable insights.  

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