Study Planning & Research Design
Plan with confidence from day one. We help you create a microbiome study that is scientifically sound, statistically robust, and clinically relevant.
- Hypothesis & Study Design: We advise on consultation on research objectives, controls, and sample size. sample size, control groups, and sequencing approaches to ensure robust, statistically sound results.
- Sequencing Strategy Optimization: Tailored 16S, shotgun metagenomics, or multi-omics approach for your study.
- Regulatory & Ethical Considerations: Our team ensures that your study aligns with relevant guidelines for clinical sample collection, data privacy, and compliance.
- Manuscript & Peer-Review Support: Ensure results are publication-ready with our expert guidance.
Outcome for You: Get a fully optimized research plan that ensures high-impact results & successful funding applications.
Microbiome Data Analysis
End-to-end workflow for clinical & research samples
From sample handling to advanced bioinformatics, we provide an end-to-end microbiome analysis pipeline. We can receive your biological samples, perform DNA extraction, organize next-generation sequencing, and deliver an in-depth pipeline analysis—including taxonomic profiling, functional/pathway annotation, and identification of AMR (antimicrobial resistance) genes.
- Sample Processing, DNA Extraction & Library Preparation: We coordinate logistics for receiving and storing clinical samples, adhering to strict quality control and biosafety standards to ensure high-purity DNA, optimized for your chosen sequencing platform.
- Sequencing & Data Processing: We handle library prep, run the sequencing, and generate high-quality reads. Then, we perform advanced filtering, decontamination, and assembly (if needed) to ensure robust downstream analysis.
- Taxonomic & Pathway Analysis: Using state-of-the-art bioinformatics pipelines to identify microbes, metabolic pathways, and other functional markers relevant to your study.
- Comprehensive Reporting & Visualization: We deliver user-friendly reports with clear data visualizations, highlighting key trends, differentially abundant taxa, and functional pathways of interest.
Outcome for You: Get high-quality, publication-ready microbiome insights with minimal effort on your end.
Custom Research Solutions
Tailored Pipelines & Specialized Analysis
No two microbiome projects are the same. We tailor analysis pipelines to meet your specific research goals.
- Bespoke Pipeline Development: We design custom workflows (in R, Python, or cloud-based tools) for specialized analyses, from gene-level variant detection to novel pathway exploration.
- Focused Functional Analysis: If you’re investigating particular AMR genes, immunological pathways, or unique microbial functions, we build targeted approaches to maximize detection and accuracy.
- Multi-Stage Consultation & Collaboration: We work alongside your team or lab, providing continuous feedback, pipeline updates, and iterative improvements as your project evolves.
- Publication Support: If you’d like our expertise throughout the publication process, we can contribute methods, figures, and manuscript reviews to strengthen your final paper.
Outcome for You: Get a custom designed analysis specific for your study’s objectives—no matter how niche or complex your research questions may be.